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  5. Smo168213

Smo168213


Description : Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl methionine synthetase


Gene families : OG0001150 (Archaeplastida) Phylogenetic Tree(s): OG0001150_tree ,
OG_05_0001057 (LandPlants) Phylogenetic Tree(s): OG_05_0001057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo168213
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00083760 evm_27.TU.AmTr_v1... Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.02 Archaeplastida
AT1G02500 MAT1, AtSAM1, SAM1, SAM-1 S-adenosylmethionine synthetase 1 0.07 Archaeplastida
AT2G36880 MAT3 methionine adenosyltransferase 3 0.07 Archaeplastida
AT4G01850 SAM2, MAT2, AtSAM2, SAM-2 S-adenosylmethionine synthetase 2 0.06 Archaeplastida
Cre06.g250200 No alias Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.01 Archaeplastida
Gb_21839 No alias S-adenosyl methionine synthetase 0.02 Archaeplastida
Gb_29410 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
Gb_29411 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
LOC_Os01g22010.3 No alias S-adenosyl methionine synthetase 0.02 Archaeplastida
LOC_Os05g04510.1 No alias S-adenosyl methionine synthetase 0.06 Archaeplastida
MA_197296g0010 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
MA_58651g0010 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
Mp8g03230.1 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
Solyc09g008280.2.1 No alias S-adenosyl methionine synthetase 0.05 Archaeplastida
Solyc10g083970.1.1 No alias S-adenosyl methionine synthetase 0.01 Archaeplastida
Solyc12g099000.3.1 No alias S-adenosyl methionine synthetase 0.01 Archaeplastida
Zm00001e026226_P001 No alias S-adenosyl methionine synthetase 0.03 Archaeplastida
Zm00001e027541_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040353_P003 No alias S-adenosyl methionine synthetase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR022628 S-AdoMet_synt_N 4 101
No external refs found!