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  5. Smo169254

Smo169254


Description : Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005481 (Archaeplastida) Phylogenetic Tree(s): OG0005481_tree ,
OG_05_0004519 (LandPlants) Phylogenetic Tree(s): OG_05_0004519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo169254
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT4G34830 MRL1 Pentatricopeptide repeat (PPR) superfamily protein 0.06 Archaeplastida
GSVIVT01024119001 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.06 Archaeplastida
Gb_33501 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.03 Archaeplastida
LOC_Os10g10170.1 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.04 Archaeplastida
MA_10429571g0010 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.07 Archaeplastida
MA_122602g0010 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.03 Archaeplastida
Mp3g17150.1 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.02 Archaeplastida
Pp3c10_19570V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Archaeplastida
Pp3c12_14320V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
Pp3c7_22430V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
Solyc01g111020.3.1 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.07 Archaeplastida
Zm00001e002719_P003 No alias Pentatricopeptide repeat-containing protein MRL1,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 8 27
No external refs found!