1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00013p00250830

AMTR_s00013p00250830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.226

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00250830
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.03 Archaeplastida
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.03 Archaeplastida
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.04 Archaeplastida
GSVIVT01021055001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 Archaeplastida
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g40940.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
MA_5039622g0010 No alias No annotation 0.05 Archaeplastida
Solyc02g071200.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g058080.3.1 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g016390.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g062010.1.1 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 30 99
No external refs found!