Smo170592

Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component

Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo170592
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00251790	evm_27.TU.AmTr_v1...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	Archaeplastida
AMTR_s00009p00255970	evm_27.TU.AmTr_v1...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.05	Archaeplastida
AT1G20010	TUB5	tubulin beta-5 chain	0.03	Archaeplastida
AT2G29550	TUB7	tubulin beta-7 chain	0.03	Archaeplastida
AT5G12250	TUB6	beta-6 tubulin	0.09	Archaeplastida
AT5G23860	TUB8	tubulin beta 8	0.04	Archaeplastida
AT5G62690	TUB2	tubulin beta chain 2	0.02	Archaeplastida
AT5G62700	TUB3	tubulin beta chain 3	0.03	Archaeplastida
Cpa\|evm.model.tig00001067.14	No alias	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	Archaeplastida
GSVIVT01019758001	No alias	Tubulin beta-4 chain OS=Eleusine indica	0.02	Archaeplastida
GSVIVT01021707001	No alias	Tubulin beta chain (Fragment) OS=Glycine max	0.04	Archaeplastida
GSVIVT01025778001	No alias	Tubulin beta-4 chain OS=Eleusine indica	0.02	Archaeplastida
Gb_15590	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.09	Archaeplastida
Gb_18746	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Archaeplastida
Gb_28116	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Archaeplastida
Gb_29799	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.06	Archaeplastida
LOC_Os01g18050.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	Archaeplastida
LOC_Os01g59150.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.12	Archaeplastida
LOC_Os02g07060.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	Archaeplastida
MA_10431251g0010	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.07	Archaeplastida
MA_18465g0010	No alias	Tubulin beta-5 chain OS=Gossypium hirsutum...	0.02	Archaeplastida
MA_230579g0020	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Archaeplastida
MA_251404g0010	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	Archaeplastida
MA_55439g0010	No alias	Tubulin beta-1 chain OS=Solanum tuberosum...	0.04	Archaeplastida
MA_7436374g0010	No alias	Tubulin beta-6 chain OS=Zea mays (sp\|q41783\|tbb6_maize : 276.0)	0.02	Archaeplastida
MA_79708g0010	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.07	Archaeplastida
MA_947959g0010	No alias	No annotation	0.07	Archaeplastida
MA_9578301g0010	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Archaeplastida
Mp1g20730.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.07	Archaeplastida
Pp3c21_17300V3.1	No alias	tubulin beta chain 2	0.02	Archaeplastida
Pp3c2_26580V3.1	No alias	tubulin beta chain 2	0.02	Archaeplastida
Pp3c5_20340V3.1	No alias	tubulin beta chain 2	0.01	Archaeplastida
Pp3c5_20690V3.1	No alias	tubulin beta 8	0.03	Archaeplastida
Pp3c6_7500V3.1	No alias	tubulin beta 8	0.03	Archaeplastida
Solyc03g025730.3.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	Archaeplastida
Solyc06g035970.3.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Archaeplastida
Solyc10g080940.3.1	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.13	Archaeplastida
Zm00001e017421_P002	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.12	Archaeplastida
Zm00001e019525_P002	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	Archaeplastida
Zm00001e022571_P001	No alias	Tubulin beta-4 chain OS=Eleusine indica...	0.05	Archaeplastida
Zm00001e028896_P004	No alias	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	Neighborhood
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Neighborhood
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0015936	coenzyme A metabolic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382

External Links

No external refs found!

Smo170592

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation