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  5. Smo171192

Smo171192


Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.CENH3 histone H3 variant


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171192
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.04 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.02 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.03 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.03 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.03 Archaeplastida
Gb_15586 No alias histone (H3) 0.02 Archaeplastida
Gb_19428 No alias histone (H3) 0.02 Archaeplastida
Gb_19430 No alias histone (H3) 0.05 Archaeplastida
Gb_27618 No alias histone (H3) 0.05 Archaeplastida
Gb_29026 No alias histone (H3) 0.04 Archaeplastida
Gb_29027 No alias histone (H3) 0.02 Archaeplastida
Gb_30564 No alias histone (H3) 0.03 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.03 Archaeplastida
MA_125055g0020 No alias Histone H3.2 OS=Cichorium intybus (sp|q5mya4|h32_cicin : 122.0) 0.02 Archaeplastida
MA_1527811g0010 No alias No annotation 0.03 Archaeplastida
MA_17527g0010 No alias histone (H3) 0.03 Archaeplastida
MA_197719g0010 No alias histone (H3) 0.03 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.02 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.02 Archaeplastida
Mp7g16200.1 No alias histone (H3) 0.03 Archaeplastida
Pp3c22_8680V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c3_37020V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.06 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.04 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.04 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.05 Archaeplastida
Solyc11g010230.2.1 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e014760_P001 No alias histone (H3) 0.04 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e018263_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040876_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 119
No external refs found!