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  5. Smo171333

Smo171333


Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.COP1 component


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree ,
OG_05_0003399 (LandPlants) Phylogenetic Tree(s): OG_05_0003399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo171333
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre02.g085050 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01007271001 No alias External stimuli response.light.red/far red... 0.03 Archaeplastida
GSVIVT01027054001 No alias External stimuli response.light.red/far red... 0.02 Archaeplastida
LOC_Os01g52640.3 No alias protein kinase (PEK) 0.06 Archaeplastida
LOC_Os05g49590.1 No alias protein kinase (PEK). regulator component SPA of... 0.02 Archaeplastida
Pp3c1_13190V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c2_15860V3.1 No alias SPA1-related 3 0.02 Archaeplastida
Pp3c5_26150V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Solyc07g063120.4.1 No alias protein kinase (PEK). regulator component SPA of... 0.07 Archaeplastida
Solyc12g013840.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.05 Archaeplastida
Zm00001e015983_P001 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 Archaeplastida
Zm00001e019928_P005 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida
Zm00001e028209_P002 No alias protein kinase (PEK). regulator component SPA of... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 427 463
No external refs found!