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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS29 component
Gene families : OG0004664 (Archaeplastida) Phylogenetic Tree(s): OG0004664_tree ,
OG_05_0003789 (LandPlants) Phylogenetic Tree(s): OG_05_0003789_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo171412 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g358556 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | Archaeplastida | |
| LOC_Os03g56241.1 | No alias | component RPS29 of SSU proteome | 0.03 | Archaeplastida | |
| LOC_Os12g32380.1 | No alias | component RPS29 of SSU proteome | 0.04 | Archaeplastida | |
| MA_10436379g0010 | No alias | component RPS29 of SSU proteome | 0.02 | Archaeplastida | |
| MA_10436379g0020 | No alias | component RPS29 of SSU proteome | 0.02 | Archaeplastida | |
| Mp8g03910.1 | No alias | component RPS29 of SSU proteome | 0.02 | Archaeplastida | |
| Pp3c14_10190V3.1 | No alias | Ribosomal protein S14p/S29e family protein | 0.03 | Archaeplastida | |
| Pp3c2_6730V3.1 | No alias | Ribosomal protein S14p/S29e family protein | 0.03 | Archaeplastida | |
| Solyc06g073430.4.1 | No alias | component RPS29 of SSU proteome | 0.02 | Archaeplastida | |
| Solyc11g020877.1.1 | No alias | component RPS29 of SSU proteome | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| MF | GO:0016151 | nickel cation binding | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001209 | Ribosomal_S14 | 7 | 56 |
| No external refs found! |