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  5. Smo172686

Smo172686


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component


Gene families : OG0003611 (Archaeplastida) Phylogenetic Tree(s): OG0003611_tree ,
OG_05_0003784 (LandPlants) Phylogenetic Tree(s): OG_05_0003784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo172686
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00256440 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.02 Archaeplastida
AMTR_s00059p00168200 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
AT1G04170 EIF2 GAMMA eukaryotic translation initiation factor 2 gamma subunit 0.03 Archaeplastida
Cpa|evm.model.tig00021433.27 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
LOC_Os12g41400.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.02 Archaeplastida
Solyc01g066690.3.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.02 Archaeplastida
Solyc05g054310.4.1 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.04 Archaeplastida
Zm00001e010573_P001 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.06 Archaeplastida
Zm00001e035274_P001 No alias component eIF2-gamma of eIF2 Met-tRNA binding factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 270 352
No external refs found!