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  5. Smo173368

Smo173368


Description : Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter


Gene families : OG0000462 (Archaeplastida) Phylogenetic Tree(s): OG0000462_tree ,
OG_05_0000754 (LandPlants) Phylogenetic Tree(s): OG_05_0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo173368
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00203p00031460 evm_27.TU.AmTr_v1... Metal transporter Nramp5 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00203p00032500 evm_27.TU.AmTr_v1... Metal transporter Nramp3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01008827001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
MA_10430197g0030 No alias metal cation transporter (NRAMP) 0.05 Archaeplastida
MA_171796g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_9182156g0010 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
Mp4g07480.1 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
Zm00001e003047_P001 No alias metal cation transporter (NRAMP) 0.01 Archaeplastida
Zm00001e013557_P001 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
Zm00001e033238_P004 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 56 418
No external refs found!