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  5. Smo175519

Smo175519


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin


Gene families : OG0004680 (Archaeplastida) Phylogenetic Tree(s): OG0004680_tree ,
OG_05_0004644 (LandPlants) Phylogenetic Tree(s): OG_05_0004644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo175519
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001239.7 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
GSVIVT01023974001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Gb_11406 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
MA_10296g0010 No alias Transportin-1 OS=Oryza sativa subsp. indica... 0.06 Archaeplastida
MA_38893g0010 No alias Transportin-1 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
Mp7g05740.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.02 Archaeplastida
Pp3c27_5090V3.1 No alias transportin 1 0.03 Archaeplastida
Pp3c6_18200V3.1 No alias transportin 1 0.02 Archaeplastida
Solyc01g111780.4.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Zm00001e042007_P001 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000357 HEAT 668 695
No external refs found!