Smo176144


Description : Protein degradation.peptidase families.serine-type peptidase activities.Deg protease


Gene families : OG0000848 (Archaeplastida) Phylogenetic Tree(s): OG0000848_tree ,
OG_05_0003561 (LandPlants) Phylogenetic Tree(s): OG_05_0003561_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo176144
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00188880 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
AT3G27925 DEGP1, Deg1 DegP protease 1 0.02 Archaeplastida
AT4G18370 HHOA, DEG5, DEGP5 DEGP protease 5 0.03 Archaeplastida
AT5G39830 DEGP8, DEG8 Trypsin family protein with PDZ domain 0.03 Archaeplastida
Cre01.g028350 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01011396001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01034494001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Gb_28169 No alias protease (Deg) 0.02 Archaeplastida
Gb_28170 No alias protease (Deg) 0.02 Archaeplastida
LOC_Os04g38640.1 No alias protease (Deg) 0.02 Archaeplastida
MA_10426639g0010 No alias protease (Deg) 0.04 Archaeplastida
MA_950571g0010 No alias Protease Do-like 8, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c1_26730V3.1 No alias DegP protease 1 0.02 Archaeplastida
Solyc02g067360.3.1 No alias protease (Deg) 0.02 Archaeplastida
Zm00001e003246_P002 No alias protease (Deg) 0.03 Archaeplastida
Zm00001e007911_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026566_P003 No alias protease (Deg) 0.02 Archaeplastida
Zm00001e032469_P001 No alias protease (Deg) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood var csrf_token = "ImQ0YWIyNTZjMjgyNTk2MGYyZTIxNWNjNzdiYmU2MTM3MGM1OWVjYTgi.Gi-Sqw.NRvMZaTiBXLeWUCVduu1FRMB_bU"; $.ajaxSetup({ beforeSend: function(xhr, settings) { if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) { xhr.setRequestHeader("X-CSRFToken", csrf_token); } } });
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!