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  5. Smo176603

Smo176603


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo176603

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00237320 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.07 Archaeplastida
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.08 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.06 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.07 Archaeplastida
GSVIVT01027073001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
Gb_19428 No alias histone (H3) 0.05 Archaeplastida
Gb_19430 No alias histone (H3) 0.06 Archaeplastida
Gb_30564 No alias histone (H3) 0.07 Archaeplastida
Gb_40804 No alias histone (H3) 0.04 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os03g27310.2 No alias histone (H3) 0.04 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.03 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.02 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.05 Archaeplastida
MA_125055g0020 No alias Histone H3.2 OS=Cichorium intybus (sp|q5mya4|h32_cicin : 122.0) 0.06 Archaeplastida
MA_1527811g0010 No alias No annotation 0.08 Archaeplastida
MA_17527g0010 No alias histone (H3) 0.08 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.06 Archaeplastida
MA_350032g0010 No alias histone (H3) 0.03 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.06 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.04 Archaeplastida
Mp7g16200.1 No alias histone (H3) 0.03 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.05 Archaeplastida
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.04 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g086800.4.1 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 122.0) 0.05 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.03 Archaeplastida
Solyc05g051500.4.1 No alias histone (H3) 0.03 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.05 Archaeplastida
Solyc11g010230.2.1 No alias histone (H3) 0.06 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.03 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.05 Archaeplastida
Zm00001e014760_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e029901_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e036599_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!