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  5. Smo177444

Smo177444


Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0005088 (LandPlants) Phylogenetic Tree(s): OG_05_0005088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo177444
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00115360 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G06670 NIH nuclear DEIH-boxhelicase 0.05 Archaeplastida
AT1G58060 No alias RNA helicase family protein 0.03 Archaeplastida
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.02 Archaeplastida
AT5G04895 No alias DEA(D/H)-box RNA helicase family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000786.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_05411 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 Archaeplastida
Gb_40990 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g02884.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g56190.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g53760.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g33275.1 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 Archaeplastida
MA_10434659g0010 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
MA_10435499g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_22839g0010 No alias DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.02 Archaeplastida
MA_291146g0010 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 Archaeplastida
Mp3g02150.1 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c11_11920V3.1 No alias RNA helicase family protein 0.05 Archaeplastida
Pp3c14_12310V3.1 No alias RNA helicase family protein 0.04 Archaeplastida
Pp3c26_14400V3.1 No alias RNA helicase family protein 0.03 Archaeplastida
Zm00001e004608_P001 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e008090_P002 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 Archaeplastida
Zm00001e017082_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e028983_P004 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 1075 1173
No external refs found!