1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00013p00262240

AMTR_s00013p00262240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.280

Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL family.RALF/RALFL precursor polypeptide


Gene families : OG0000804 (Archaeplastida) Phylogenetic Tree(s): OG0000804_tree ,
OG_05_0000478 (LandPlants) Phylogenetic Tree(s): OG_05_0000478_tree ,
OG_06_0000327 (SeedPlants) Phylogenetic Tree(s): OG_06_0000327_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00262240
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00078480 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida
AMTR_s00044p00139580 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida
AT1G02900 RALF1, ATRALF1, RALFL1 rapid alkalinization factor 1 0.06 Archaeplastida
AT3G05490 RALFL22 ralf-like 22 0.04 Archaeplastida
AT3G16570 RALF23, ATRALF23 rapid alkalinization factor 23 0.03 Archaeplastida
AT4G15800 RALFL33 ralf-like 33 0.06 Archaeplastida
GSVIVT01027973001 No alias Phytohormones.signalling peptides.CRP... 0.07 Archaeplastida
Gb_24936 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
Gb_29483 No alias RALF/RALFL precursor polypeptide 0.05 Archaeplastida
LOC_Os01g10470.1 No alias RALF/RALFL precursor polypeptide 0.02 Archaeplastida
LOC_Os01g25540.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
LOC_Os01g25560.1 No alias RALF/RALFL precursor polypeptide 0.05 Archaeplastida
LOC_Os01g70690.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
LOC_Os02g44940.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
LOC_Os03g22440.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
LOC_Os10g18170.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
LOC_Os11g26880.1 No alias RALF/RALFL precursor polypeptide 0.05 Archaeplastida
MA_52559g0010 No alias RALF/RALFL precursor polypeptide 0.04 Archaeplastida
MA_6960g0020 No alias RALF/RALFL precursor polypeptide 0.02 Archaeplastida
Solyc07g063030.3.1 No alias RALF/RALFL precursor polypeptide 0.03 Archaeplastida
Solyc09g074890.1.1 No alias RALF/RALFL precursor polypeptide 0.05 Archaeplastida
Zm00001e039701_P001 No alias RALF/RALFL precursor polypeptide 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR008801 RALF 48 105
No external refs found!