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  4. Sequence
  5. Smo182311

Smo182311


Description : Polyamine metabolism.spermidine/spermine.synthesis.thermospermine synthase


Gene families : OG0003748 (Archaeplastida) Phylogenetic Tree(s): OG0003748_tree ,
OG_05_0003785 (LandPlants) Phylogenetic Tree(s): OG_05_0003785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo182311
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT5G19530 ACL5 S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Archaeplastida
Gb_26541 No alias thermospermine synthase 0.02 Archaeplastida
Gb_38598 No alias thermospermine synthase 0.04 Archaeplastida
MA_317525g0010 No alias thermospermine synthase 0.02 Archaeplastida
Solyc07g041300.2.1 No alias thermospermine synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!