Smo183216

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP1-type dynamin

Gene families : OG0001056 (Archaeplastida) Phylogenetic Tree(s): OG0001056_tree ,
OG_05_0000714 (LandPlants) Phylogenetic Tree(s): OG_05_0000714_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo183216
Cluster	HCCA: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
AT1G14830	DRP1C, ADL1C, DL1C, ADL5	DYNAMIN-like 1C	0.02	Archaeplastida
AT3G61760	ADL1B, DL1B	DYNAMIN-like 1B	0.02	Archaeplastida
Cre05.g245950	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	Archaeplastida
LOC_Os03g50520.1	No alias	DRP1-type clathrin coated vesicle dynamin	0.04	Archaeplastida
LOC_Os05g48240.1	No alias	DRP1-type clathrin coated vesicle dynamin	0.02	Archaeplastida
LOC_Os09g39960.1	No alias	DRP1-type clathrin coated vesicle dynamin	0.02	Archaeplastida
MA_197340g0010	No alias	DRP1-type clathrin coated vesicle dynamin	0.02	Archaeplastida
MA_4305g0010	No alias	Dynamin-related protein 12A OS=Glycine max...	0.02	Archaeplastida
MA_9085556g0010	No alias	DRP1-type clathrin coated vesicle dynamin	0.02	Archaeplastida
Pp3c19_3590V3.1	No alias	DYNAMIN-like 1E	0.03	Archaeplastida
Pp3c22_1100V3.1	No alias	DYNAMIN-like 1C	0.03	Archaeplastida
Smo266589	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	Archaeplastida
Solyc01g005310.3.1	No alias	DRP1-type clathrin coated vesicle dynamin	0.02	Archaeplastida
Zm00001e005459_P001	No alias	DRP1-type clathrin coated vesicle dynamin	0.03	Archaeplastida
Zm00001e009452_P001	No alias	DRP1-type clathrin coated vesicle dynamin	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEP	Neighborhood
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005777	peroxisome	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
CC	GO:0042579	microbody	IEP	Neighborhood
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022812	Dynamin_SF	40	214

External Links

No external refs found!

Smo183216

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation