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  5. AMTR_s00014p00090750

AMTR_s00014p00090750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.29

Description : Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana


Gene families : OG0003117 (Archaeplastida) Phylogenetic Tree(s): OG0003117_tree ,
OG_05_0004231 (LandPlants) Phylogenetic Tree(s): OG_05_0004231_tree ,
OG_06_0006115 (SeedPlants) Phylogenetic Tree(s): OG_06_0006115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00090750
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G18260 No alias Cytochrome b561/ferric reductase transmembrane protein family 0.05 Archaeplastida
GSVIVT01020846001 No alias Cytochrome b561 domain-containing protein At2g30890... 0.03 Archaeplastida
LOC_Os01g47635.1 No alias Cytochrome b561 domain-containing protein At2g30890... 0.04 Archaeplastida
LOC_Os05g49040.1 No alias Cytochrome b561 domain-containing protein At2g30890... 0.05 Archaeplastida
Pp3c1_28990V3.1 No alias Cytochrome b561/ferric reductase transmembrane protein family 0.02 Archaeplastida
Pp3c2_10210V3.1 No alias Cytochrome b561/ferric reductase transmembrane protein family 0.02 Archaeplastida
Solyc02g070660.3.1 No alias Cytochrome b561 domain-containing protein At4g18260... 0.06 Archaeplastida
Solyc07g045490.3.1 No alias Cytochrome b561 domain-containing protein At4g18260... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!