Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL12 component
Gene families : OG0002167 (Archaeplastida) Phylogenetic Tree(s): OG0002167_tree ,
OG_05_0002069 (LandPlants) Phylogenetic Tree(s): OG_05_0002069_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo227409 | |
Cluster | HCCA: Cluster_180 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00105p00048810 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
AMTR_s00148p00026900 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
AT2G37190 | No alias | Ribosomal protein L11 family protein | 0.17 | Archaeplastida | |
AT3G53430 | No alias | Ribosomal protein L11 family protein | 0.06 | Archaeplastida | |
AT5G60670 | No alias | Ribosomal protein L11 family protein | 0.13 | Archaeplastida | |
Cpa|evm.model.tig00001339.27 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
Cre12.g528750 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | Archaeplastida | |
GSVIVT01016274001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | Archaeplastida | |
GSVIVT01025189001 | No alias | No description available | 0.1 | Archaeplastida | |
GSVIVT01025683001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | Archaeplastida | |
LOC_Os02g47140.1 | No alias | component RPL12 of LSU proteome component | 0.07 | Archaeplastida | |
LOC_Os04g50990.1 | No alias | component RPL12 of LSU proteome component | 0.13 | Archaeplastida | |
MA_10427147g0010 | No alias | component RPL12 of LSU proteome component | 0.13 | Archaeplastida | |
Mp3g02020.1 | No alias | component RPL12 of LSU proteome component | 0.14 | Archaeplastida | |
Pp3c15_14410V3.1 | No alias | Ribosomal protein L11 family protein | 0.11 | Archaeplastida | |
Pp3c16_2860V3.1 | No alias | Ribosomal protein L11 family protein | 0.15 | Archaeplastida | |
Pp3c27_660V3.1 | No alias | Ribosomal protein L11 family protein | 0.11 | Archaeplastida | |
Pp3c6_19290V3.1 | No alias | Ribosomal protein L11 family protein | 0.12 | Archaeplastida | |
Pp3c9_15380V3.1 | No alias | Ribosomal protein L11 family protein | 0.12 | Archaeplastida | |
Solyc06g075180.1.1 | No alias | component RPL12 of LSU proteome component | 0.06 | Archaeplastida | |
Solyc11g065670.1.1 | No alias | component RPL12 of LSU proteome component | 0.11 | Archaeplastida | |
Solyc11g069440.1.1 | No alias | component RPL12 of LSU proteome component | 0.11 | Archaeplastida | |
Zm00001e007067_P001 | No alias | component RPL12 of LSU proteome component | 0.06 | Archaeplastida | |
Zm00001e008316_P001 | No alias | component RPL12 of LSU proteome component | 0.07 | Archaeplastida | |
Zm00001e023297_P001 | No alias | component RPL12 of LSU proteome component | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
BP | GO:0050658 | RNA transport | IEP | Neighborhood |
BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
BP | GO:0051168 | nuclear export | IEP | Neighborhood |
BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
CC | GO:0099023 | tethering complex | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020783 | Ribosomal_L11_C | 75 | 144 |
No external refs found! |