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  5. Smo227615

Smo227615


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein


Gene families : OG0006953 (Archaeplastida) Phylogenetic Tree(s): OG0006953_tree ,
OG_05_0008269 (LandPlants) Phylogenetic Tree(s): OG_05_0008269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo227615
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083110 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.04 Archaeplastida
Cre06.g273700 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
GSVIVT01012045001 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 Archaeplastida
Gb_03750 No alias HCF136 protein involved in PS-II assembly 0.03 Archaeplastida
MA_10433328g0010 No alias HCF136 protein involved in PS-II assembly 0.06 Archaeplastida
Mp4g23900.1 No alias HCF136 protein involved in PS-II assembly 0.04 Archaeplastida
Pp3c15_7930V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.04 Archaeplastida
Pp3c9_10350V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.02 Archaeplastida
Solyc02g014150.4.1 No alias HCF136 protein involved in PS-II assembly 0.03 Archaeplastida
Zm00001e030125_P002 No alias HCF136 protein involved in PS-II assembly 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 79 400
No external refs found!