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Description : Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
Gene families : OG0002780 (Archaeplastida) Phylogenetic Tree(s): OG0002780_tree ,
OG_05_0003783 (LandPlants) Phylogenetic Tree(s): OG_05_0003783_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo229587 | |
| Cluster | HCCA: Cluster_173 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00187330 | evm_27.TU.AmTr_v1... | Prolycopene isomerase, chloroplastic OS=Daucus carota | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00001258.10 | No alias | No description available | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020723.8 | No alias | No description available | 0.02 | Archaeplastida | |
| Cre09.g407200 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.02 | Archaeplastida | |
| Cre16.g674950 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.04 | Archaeplastida | |
| LOC_Os03g62510.1 | No alias | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.06 | Archaeplastida | |
| MA_10428345g0020 | No alias | Prolycopene isomerase, chloroplastic OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Pp3c2_2830V3.1 | No alias | FAD/NAD(P)-binding oxidoreductase family protein | 0.03 | Archaeplastida | |
| Solyc05g010180.4.1 | No alias | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.03 | Archaeplastida | |
| Zm00001e011669_P002 | No alias | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0055114 | oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006553 | lysine metabolic process | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| MF | GO:0010242 | oxygen evolving activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Neighborhood |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 34 | 530 |
| No external refs found! |