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  5. Smo230161

Smo230161


Description : Pathogenesis-related protein 1C OS=Nicotiana tabacum


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230161
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00200890 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 Archaeplastida
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.05 Archaeplastida
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.03 Archaeplastida
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
GSVIVT01036997001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
GSVIVT01037005001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 Archaeplastida
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.04 Archaeplastida
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
LOC_Os01g28450.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
LOC_Os02g27300.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
LOC_Os02g27310.1 No alias Cysteine-rich receptor-like protein kinase 6 OS=Oryza... 0.03 Archaeplastida
LOC_Os02g54560.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os02g54570.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
LOC_Os04g22210.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
LOC_Os07g03288.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os07g03377.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os07g03610.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os07g03620.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os07g03680.1 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
LOC_Os07g03690.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os10g11500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_245441g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
MA_300767g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_501572g0010 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.05 Archaeplastida
MA_54271g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_66540g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Mp3g14100.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Pp3c11_1180V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Pp3c17_17400V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 Archaeplastida
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
Smo101466 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.04 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.04 Archaeplastida
Solyc09g005950.3.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
Zm00001e008453_P001 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 Archaeplastida
Zm00001e011196_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016074_P001 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
Zm00001e033272_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 36 159
No external refs found!