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  5. Smo230202

Smo230202


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230202
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.01 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.02 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 Archaeplastida
AT5G39260 EXPA21, EXP21,... expansin A21 0.02 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.04 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.02 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01032935001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01035233001 No alias Expansin-A13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.02 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.04 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.04 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10429288g0020 No alias Expansin-A2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g03890.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09750.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.01 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.02 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc06g005560.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc06g049050.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e029218_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 163 241
No external refs found!