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  5. Smo230291

Smo230291


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL24 component


Gene families : OG0002020 (Archaeplastida) Phylogenetic Tree(s): OG0002020_tree ,
OG_05_0007124 (LandPlants) Phylogenetic Tree(s): OG_05_0007124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230291
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT5G54600 No alias Translation protein SH3-like family protein 0.07 Archaeplastida
Cre16.g652550 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_13209 No alias 50S ribosomal protein L24, chloroplastic OS=Spinacia... 0.07 Archaeplastida
LOC_Os06g46930.1 No alias component psRPL24 of large ribosomal subunit proteome 0.06 Archaeplastida
MA_10018366g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9411466g0010 No alias 50S ribosomal protein L24, chloroplastic OS=Spinacia... 0.02 Archaeplastida
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.08 Archaeplastida
Pp3c15_17530V3.1 No alias Translation protein SH3-like family protein 0.05 Archaeplastida
Pp3c9_9200V3.1 No alias Translation protein SH3-like family protein 0.03 Archaeplastida
Solyc07g063960.3.1 No alias component psRPL24 of large ribosomal subunit proteome 0.03 Archaeplastida
Zm00001e013043_P001 No alias component psRPL24 of large ribosomal subunit proteome 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 85 149
No external refs found!