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  5. Smo231326

Smo231326


Description : Tetraspanin-3 OS=Arabidopsis thaliana


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo231326
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT2G19580 TET2 tetraspanin2 0.02 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.05 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.03 Archaeplastida
AT4G30430 TET9 tetraspanin9 0.03 Archaeplastida
AT5G60220 TET4 tetraspanin4 0.01 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_27470 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g03140.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g03530.1 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g37510.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g44310.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g16050.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_100296g0010 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_139843g0010 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_485622g0010 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_81058g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g07130.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c21_1270V3.1 No alias tetraspanin8 0.02 Archaeplastida
Pp3c4_3550V3.1 No alias tetraspanin10 0.02 Archaeplastida
Pp3c8_3750V3.1 No alias tetraspanin10 0.02 Archaeplastida
Solyc03g114480.4.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g025510.4.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g076850.3.1 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g038410.2.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027574_P006 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e034206_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e039133_P001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 3 238
No external refs found!