- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component
Gene families : OG0002783 (Archaeplastida) Phylogenetic Tree(s): OG0002783_tree ,
OG_05_0002632 (LandPlants) Phylogenetic Tree(s): OG_05_0002632_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo231540 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00205760 | evm_27.TU.AmTr_v1... | Protein degradation.26S proteasome.regulatory... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020614.5 | No alias | Protein degradation.26S proteasome.regulatory... | 0.02 | Archaeplastida | |
| Cre06.g275650 | No alias | Protein degradation.26S proteasome.regulatory... | 0.03 | Archaeplastida | |
| GSVIVT01024003001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.03 | Archaeplastida | |
| LOC_Os09g37000.1 | No alias | regulatory component RPN3 of 26S proteasome | 0.02 | Archaeplastida | |
| Mp2g07250.1 | No alias | regulatory component RPN3 of 26S proteasome | 0.03 | Archaeplastida | |
| Solyc01g111710.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030234 | enzyme regulator activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013586 | 26S_Psome_reg_C | 414 | 481 |
| No external refs found! |