Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.PRC2 histone methylation complex.VRN/FIS/EMF core complexes.MSI1 component
Gene families : OG0002471 (Archaeplastida) Phylogenetic Tree(s): OG0002471_tree ,
OG_05_0002260 (LandPlants) Phylogenetic Tree(s): OG_05_0002260_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo233646 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G16780 | MSI2, NFC2, NFC02, MSI02 | Transducin family protein / WD-40 repeat family protein | 0.02 | Archaeplastida | |
GSVIVT01024023001 | No alias | Chromatin organisation.histone chaperone activities.CAF1... | 0.03 | Archaeplastida | |
LOC_Os03g43890.1 | No alias | component CAF1c/MSI of CAF1 histone chaperone complex.... | 0.02 | Archaeplastida | |
Mp4g21020.1 | No alias | component CAF1c/MSI of CAF1 histone chaperone complex.... | 0.02 | Archaeplastida | |
Solyc01g111590.4.1 | No alias | component CAF1c/MSI of CAF1 histone chaperone complex | 0.04 | Archaeplastida | |
Zm00001e035979_P001 | No alias | component CAF1c/MSI of CAF1 histone chaperone complex | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005840 | ribosome | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Neighborhood |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Neighborhood |
MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
MF | GO:0016854 | racemase and epimerase activity | IEP | Neighborhood |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0047661 | amino-acid racemase activity | IEP | Neighborhood |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001680 | WD40_repeat | 174 | 207 |
No external refs found! |