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  4. Sequence
  5. Smo235693

Smo235693


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein


Gene families : OG0006338 (Archaeplastida) Phylogenetic Tree(s): OG0006338_tree ,
OG_05_0007788 (LandPlants) Phylogenetic Tree(s): OG_05_0007788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo235693
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00228610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AT4G35250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 Archaeplastida
Cre02.g142146 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01023933001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
Gb_20261 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_20263 No alias HCF244 protein involved in PS-II assembly 0.02 Archaeplastida
LOC_Os08g44000.1 No alias HCF244 protein involved in PS-II assembly 0.07 Archaeplastida
MA_10432153g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10437102g0010 No alias HCF244 protein involved in PS-II assembly 0.07 Archaeplastida
Mp8g06810.1 No alias HCF244 protein involved in PS-II assembly 0.06 Archaeplastida
Pp3c27_8140V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.09 Archaeplastida
Solyc01g112060.4.1 No alias HCF244 protein involved in PS-II assembly 0.05 Archaeplastida
Zm00001e003972_P002 No alias HCF244 protein involved in PS-II assembly 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR008030 NmrA-like 15 237
No external refs found!