1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00014p00243510

AMTR_s00014p00243510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.114

Description : Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E3 dihydrolipoamide dehydrogenase component


Gene families : OG0003196 (Archaeplastida) Phylogenetic Tree(s): OG0003196_tree ,
OG_05_0003836 (LandPlants) Phylogenetic Tree(s): OG_05_0003836_tree ,
OG_06_0004217 (SeedPlants) Phylogenetic Tree(s): OG_06_0004217_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00243510
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00129240 evm_27.TU.AmTr_v1... Amino acid metabolism.degradation.branched-chain amino... 0.04 Archaeplastida
LOC_Os05g06750.1 No alias dihydrolipoyl dehydrogenase component L-protein of... 0.04 Archaeplastida
Zm00001e026238_P002 No alias dihydrolipoyl dehydrogenase component L-protein of... 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0045454 cell redox homeostasis IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 45 357
IPR004099 Pyr_nucl-diS_OxRdtase_dimer 388 497
No external refs found!