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Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component
Gene families : OG0001089 (Archaeplastida) Phylogenetic Tree(s): OG0001089_tree ,
OG_05_0002771 (LandPlants) Phylogenetic Tree(s): OG_05_0002771_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo266789 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01037973001 | No alias | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.08 | Archaeplastida | |
| LOC_Os03g43860.1 | No alias | component VPS2/CHMP2 of ESCRT-III complex | 0.02 | Archaeplastida | |
| Pp3c13_6090V3.1 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.04 | Archaeplastida | |
| Pp3c3_2240V3.1 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| CC | GO:0099023 | tethering complex | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 19 | 186 |
| No external refs found! |