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  5. Smo267830

Smo267830


Description : Cell wall.callose.callose synthase


Gene families : OG0000126 (Archaeplastida) Phylogenetic Tree(s): OG0000126_tree ,
OG_05_0000405 (LandPlants) Phylogenetic Tree(s): OG_05_0000405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo267830
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00150590 evm_27.TU.AmTr_v1... Cell wall.callose.callose synthase 0.02 Archaeplastida
AT2G31960 GSL03, ATGSL3, ATGSL03 glucan synthase-like 3 0.03 Archaeplastida
AT2G36850 ATGSL08, ATGSL8,... glucan synthase-like 8 0.04 Archaeplastida
AT3G07160 ATGSL10, gsl10, CALS9 glucan synthase-like 10 0.03 Archaeplastida
AT4G04970 ATGSL01, GSL01,... glucan synthase-like 1 0.04 Archaeplastida
AT5G13000 gsl12, ATGSL12 glucan synthase-like 12 0.03 Archaeplastida
GSVIVT01005204001 No alias Cell wall.callose.callose synthase 0.04 Archaeplastida
GSVIVT01007560001 No alias Cell wall.callose.callose synthase 0.03 Archaeplastida
Gb_01752 No alias callose synthase 0.03 Archaeplastida
MA_101796g0010 No alias Callose synthase 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10426974g0020 No alias callose synthase 0.03 Archaeplastida
MA_9871521g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp2g04240.1 No alias callose synthase 0.02 Archaeplastida
Mp4g17120.1 No alias callose synthase 0.04 Archaeplastida
Pp3c25_6500V3.1 No alias glucan synthase-like 10 0.02 Archaeplastida
Pp3c4_15060V3.1 No alias glucan synthase-like 5 0.03 Archaeplastida
Pp3c9_4143V3.1 No alias callose synthase 5 0.03 Archaeplastida
Solyc01g006350.4.1 No alias callose synthase 0.03 Archaeplastida
Solyc01g006360.4.1 No alias Callose synthase 9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e000142_P001 No alias callose synthase 0.04 Archaeplastida
Zm00001e002613_P001 No alias callose synthase 0.02 Archaeplastida
Zm00001e013335_P001 No alias callose synthase 0.03 Archaeplastida
Zm00001e019786_P001 No alias callose synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030490 maturation of SSU-rRNA IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!