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  5. Smo267958

Smo267958


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG0002126 (Archaeplastida) Phylogenetic Tree(s): OG0002126_tree ,
OG_05_0001928 (LandPlants) Phylogenetic Tree(s): OG_05_0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo267958
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00179170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
AT2G37600 No alias Ribosomal protein L36e family protein 0.13 Archaeplastida
AT3G53740 No alias Ribosomal protein L36e family protein 0.15 Archaeplastida
AT5G02450 No alias Ribosomal protein L36e family protein 0.15 Archaeplastida
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01026914001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01028917001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Gb_10248 No alias component RPL36 of LSU proteome component 0.07 Archaeplastida
Gb_27261 No alias component RPL36 of LSU proteome component 0.07 Archaeplastida
LOC_Os01g62350.1 No alias component RPL36 of LSU proteome component 0.09 Archaeplastida
LOC_Os05g38520.1 No alias component RPL36 of LSU proteome component 0.13 Archaeplastida
MA_10430792g0010 No alias component RPL36 of LSU proteome component 0.11 Archaeplastida
MA_24782g0010 No alias component RPL36 of LSU proteome component 0.04 Archaeplastida
MA_69756g0010 No alias component RPL36 of LSU proteome component 0.03 Archaeplastida
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.11 Archaeplastida
Pp3c14_19960V3.1 No alias Ribosomal protein L36e family protein 0.12 Archaeplastida
Pp3c1_32310V3.1 No alias Ribosomal protein L36e family protein 0.06 Archaeplastida
Pp3c2_9650V3.1 No alias Ribosomal protein L36e family protein 0.11 Archaeplastida
Solyc03g025520.4.1 No alias component RPL36 of LSU proteome component 0.05 Archaeplastida
Solyc06g036050.4.1 No alias component RPL36 of LSU proteome component 0.02 Archaeplastida
Zm00001e027238_P001 No alias component RPL36 of LSU proteome component 0.09 Archaeplastida
Zm00001e031832_P002 No alias component RPL36 of LSU proteome component 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 9 101
No external refs found!