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  5. Smo267976

Smo267976


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18 component


Gene families : OG0001941 (Archaeplastida) Phylogenetic Tree(s): OG0001941_tree ,
OG_05_0001876 (LandPlants) Phylogenetic Tree(s): OG_05_0001876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo267976
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.26 Archaeplastida
Cpa|evm.model.tig00000142.18 No alias 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.21 Archaeplastida
Cre12.g512600 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01028036001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
GSVIVT01031168001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01035120001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
Gb_16720 No alias component RPL18 of LSU proteome component 0.02 Archaeplastida
Gb_21301 No alias component RPL18 of LSU proteome component 0.07 Archaeplastida
LOC_Os03g22180.1 No alias component RPL18 of LSU proteome component 0.19 Archaeplastida
LOC_Os05g06310.1 No alias component RPL18 of LSU proteome component 0.26 Archaeplastida
LOC_Os07g47780.1 No alias component RPL18 of LSU proteome component 0.22 Archaeplastida
MA_5630845g0010 No alias no hits & (original description: none) 0.23 Archaeplastida
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.3 Archaeplastida
Pp3c1_3480V3.1 No alias ribosomal protein L18 0.31 Archaeplastida
Pp3c1_5330V3.1 No alias ribosomal protein L18 0.24 Archaeplastida
Pp3c2_32510V3.1 No alias ribosomal protein L18 0.36 Archaeplastida
Pp3c2_34080V3.1 No alias ribosomal protein L18 0.25 Archaeplastida
Pp3c7_22030V3.1 No alias ribosomal protein L18 0.13 Archaeplastida
Solyc01g099900.4.1 No alias component RPL18 of LSU proteome component 0.24 Archaeplastida
Solyc09g075290.3.1 No alias component RPL18 of LSU proteome component 0.26 Archaeplastida
Zm00001e026750_P001 No alias component RPL18 of LSU proteome component 0.25 Archaeplastida
Zm00001e031155_P001 No alias component RPL18 of LSU proteome component 0.24 Archaeplastida
Zm00001e035836_P001 No alias component RPL18 of LSU proteome component 0.22 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 187
No external refs found!