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  4. Sequence
  5. Smo268515

Smo268515


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL31 component


Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo268515
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00230660 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AT2G19740 No alias Ribosomal protein L31e family protein 0.02 Archaeplastida
AT4G26230 No alias Ribosomal protein L31e family protein 0.02 Archaeplastida
AT5G56710 No alias Ribosomal protein L31e family protein 0.09 Archaeplastida
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.18 Archaeplastida
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Gb_05851 No alias component RPL31 of LSU proteome component 0.06 Archaeplastida
Gb_24728 No alias component RPL31 of LSU proteome component 0.08 Archaeplastida
LOC_Os02g48660.1 No alias component RPL31 of LSU proteome component 0.15 Archaeplastida
LOC_Os06g21480.1 No alias component RPL31 of LSU proteome component 0.02 Archaeplastida
LOC_Os08g39500.1 No alias component RPL31 of LSU proteome component 0.03 Archaeplastida
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.21 Archaeplastida
Pp3c10_8090V3.1 No alias Ribosomal protein L31e family protein 0.16 Archaeplastida
Pp3c14_7550V3.1 No alias Ribosomal protein L31e family protein 0.21 Archaeplastida
Pp3c1_34390V3.1 No alias Ribosomal protein L31e family protein 0.16 Archaeplastida
Pp3c25_8980V3.1 No alias Ribosomal protein L31e family protein 0.04 Archaeplastida
Pp3c2_16490V3.1 No alias Ribosomal protein L31e family protein 0.21 Archaeplastida
Solyc05g008010.3.1 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
Solyc12g008720.2.1 No alias component RPL31 of LSU proteome component 0.21 Archaeplastida
Zm00001e003520_P001 No alias component RPL31 of LSU proteome component 0.04 Archaeplastida
Zm00001e015659_P001 No alias component RPL31 of LSU proteome component 0.02 Archaeplastida
Zm00001e023413_P001 No alias component RPL31 of LSU proteome component 0.12 Archaeplastida
Zm00001e036927_P001 No alias component RPL31 of LSU proteome component 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 12 93
No external refs found!