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  5. Smo269977

Smo269977


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component


Gene families : OG0002938 (Archaeplastida) Phylogenetic Tree(s): OG0002938_tree ,
OG_05_0005555 (LandPlants) Phylogenetic Tree(s): OG_05_0005555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo269977
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00062980 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
AT3G57290 TIF3E1, INT6,... eukaryotic translation initiation factor 3E 0.04 Archaeplastida
Cpa|evm.model.tig00000093.43 No alias Protein biosynthesis.translation... 0.01 Archaeplastida
Cre12.g498100 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
GSVIVT01005045001 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
LOC_Os07g12110.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
MA_7274g0020 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Mp3g01990.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Pp3c20_5690V3.1 No alias eukaryotic translation initiation factor 3E 0.06 Archaeplastida
Pp3c8_15010V3.1 No alias eukaryotic translation initiation factor 3E 0.03 Archaeplastida
Solyc10g079880.2.1 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Zm00001e009393_P005 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
Zm00001e033116_P002 No alias component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000717 PCI_dom 284 398
No external refs found!