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  5. Smo270225

Smo270225


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP III transcription factor


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270225
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01017010001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01035612001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_10259 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
LOC_Os10g33960.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
MA_10429434g0010 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Solyc03g120910.4.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e003226_P004 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e025995_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 190 393
No external refs found!