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  4. Sequence
  5. Smo270704

Smo270704


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL22 component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270704
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
AT3G05560 No alias Ribosomal L22e protein family 0.06 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.06 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_08874 No alias component RPL22 of LSU proteome component 0.07 Archaeplastida
Gb_36164 No alias component RPL22 of LSU proteome component 0.1 Archaeplastida
LOC_Os03g22340.1 No alias component RPL22 of LSU proteome component 0.08 Archaeplastida
LOC_Os07g47710.1 No alias component RPL22 of LSU proteome component 0.08 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.05 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.07 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.06 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.04 Archaeplastida
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.02 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.08 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.11 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.11 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.02 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.08 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.06 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.05 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.04 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.07 Archaeplastida
Zm00001e038221_P001 No alias component RPL22 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0030150 protein import into mitochondrial matrix IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 17 126
No external refs found!