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Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component
Gene families : OG0005901 (Archaeplastida) Phylogenetic Tree(s): OG0005901_tree ,
OG_05_0006317 (LandPlants) Phylogenetic Tree(s): OG_05_0006317_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo270732 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G44890 | RPL9 | ribosomal protein L9 | 0.08 | Archaeplastida | |
| Cre12.g556050 | No alias | Protein biosynthesis.organelle translation... | 0.03 | Archaeplastida | |
| GSVIVT01031460001 | No alias | Protein biosynthesis.organelle translation... | 0.04 | Archaeplastida | |
| LOC_Os02g57670.1 | No alias | component psRPL9 of large ribosomal subunit proteome | 0.08 | Archaeplastida | |
| MA_8767694g0010 | No alias | component psRPL9 of large ribosomal subunit proteome | 0.04 | Archaeplastida | |
| Mp1g05730.1 | No alias | component psRPL9 of large ribosomal subunit proteome | 0.05 | Archaeplastida | |
| Pp3c1_5300V3.1 | No alias | ribosomal protein L9 | 0.04 | Archaeplastida | |
| Pp3c2_34110V3.1 | No alias | ribosomal protein L9 | 0.04 | Archaeplastida | |
| Pp3c2_34120V3.1 | No alias | ribosomal protein L9 | 0.03 | Archaeplastida | |
| Solyc11g066410.2.1 | No alias | component psRPL9 of large ribosomal subunit proteome | 0.03 | Archaeplastida | |
| Zm00001e016155_P002 | No alias | component psRPL9 of large ribosomal subunit proteome | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Neighborhood |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Neighborhood |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR020069 | Ribosomal_L9_C | 109 | 192 |
| No external refs found! |