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  4. Sequence
  5. Smo270936

Smo270936


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS17 component


Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree ,
OG_05_0002018 (LandPlants) Phylogenetic Tree(s): OG_05_0002018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo270936
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00243530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
AT2G04390 No alias Ribosomal S17 family protein 0.05 Archaeplastida
AT2G05220 No alias Ribosomal S17 family protein 0.14 Archaeplastida
AT3G10610 No alias Ribosomal S17 family protein 0.15 Archaeplastida
AT5G04800 No alias Ribosomal S17 family protein 0.13 Archaeplastida
Cre12.g498250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
GSVIVT01033920001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
GSVIVT01034653001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
LOC_Os03g01900.1 No alias component RPS17 of SSU proteome 0.04 Archaeplastida
LOC_Os10g27190.1 No alias component RPS17 of SSU proteome 0.08 Archaeplastida
MA_184894g0010 No alias component RPS17 of SSU proteome 0.2 Archaeplastida
MA_217540g0010 No alias component RPS17 of SSU proteome 0.03 Archaeplastida
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.18 Archaeplastida
Pp3c11_2530V3.1 No alias Ribosomal S17 family protein 0.15 Archaeplastida
Pp3c11_2540V3.1 No alias Ribosomal S17 family protein 0.22 Archaeplastida
Pp3c2_34780V3.1 No alias Ribosomal S17 family protein 0.15 Archaeplastida
Pp3c7_21070V3.1 No alias Ribosomal S17 family protein 0.04 Archaeplastida
Pp3c7_21140V3.1 No alias Ribosomal S17 family protein 0.18 Archaeplastida
Solyc05g055230.2.1 No alias component RPS17 of SSU proteome 0.11 Archaeplastida
Solyc10g150146.1.1 No alias component RPS17 of SSU proteome 0.18 Archaeplastida
Solyc11g006690.1.1 No alias component RPS17 of SSU proteome 0.11 Archaeplastida
Zm00001e030769_P001 No alias component RPS17 of SSU proteome 0.04 Archaeplastida
Zm00001e036233_P001 No alias component RPS17 of SSU proteome 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 119
No external refs found!