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  5. Smo271371

Smo271371


Description : Cell wall.pectin.modification and degradation.pectin acetylesterase


Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo271371
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00148030 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.02 Archaeplastida
AT1G09550 No alias Pectinacetylesterase family protein 0.03 Archaeplastida
AT3G05910 No alias Pectinacetylesterase family protein 0.05 Archaeplastida
AT3G62060 No alias Pectinacetylesterase family protein 0.02 Archaeplastida
AT4G19410 No alias Pectinacetylesterase family protein 0.04 Archaeplastida
AT5G23870 No alias Pectinacetylesterase family protein 0.02 Archaeplastida
AT5G45280 No alias Pectinacetylesterase family protein 0.05 Archaeplastida
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 Archaeplastida
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 Archaeplastida
Gb_04448 No alias pectin acetylesterase 0.05 Archaeplastida
Gb_15309 No alias pectin acetylesterase 0.08 Archaeplastida
Gb_28229 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os01g66830.1 No alias pectin acetylesterase 0.04 Archaeplastida
LOC_Os01g66840.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os01g66850.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os07g44070.1 No alias pectin acetylesterase 0.08 Archaeplastida
LOC_Os10g40290.1 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10432685g0010 No alias pectin acetylesterase 0.03 Archaeplastida
MA_3303g0010 No alias pectin acetylesterase 0.03 Archaeplastida
MA_52077g0010 No alias pectin acetylesterase 0.02 Archaeplastida
Pp3c7_3640V3.1 No alias Pectinacetylesterase family protein 0.02 Archaeplastida
Solyc10g086480.3.1 No alias pectin acetylesterase 0.02 Archaeplastida
Zm00001e017068_P001 No alias pectin acetylesterase 0.03 Archaeplastida
Zm00001e017534_P003 No alias Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e018996_P001 No alias pectin acetylesterase 0.03 Archaeplastida
Zm00001e035651_P001 No alias pectin acetylesterase 0.04 Archaeplastida
Zm00001e037910_P001 No alias pectin acetylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 55 394
No external refs found!