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  5. Smo271906

Smo271906


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo271906
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
AT3G04840 No alias Ribosomal protein S3Ae 0.15 Archaeplastida
AT4G34670 No alias Ribosomal protein S3Ae 0.17 Archaeplastida
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
GSVIVT01018024001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Gb_02289 No alias component RPS3a of SSU proteome 0.08 Archaeplastida
LOC_Os02g18550.1 No alias component RPS3a of SSU proteome 0.1 Archaeplastida
LOC_Os03g10340.1 No alias component RPS3a of SSU proteome 0.16 Archaeplastida
LOC_Os12g21798.1 No alias component RPS3a of SSU proteome 0.1 Archaeplastida
MA_124901g0010 No alias component RPS3a of SSU proteome 0.02 Archaeplastida
MA_31004g0010 No alias component RPS3a of SSU proteome 0.11 Archaeplastida
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.14 Archaeplastida
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.08 Archaeplastida
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.03 Archaeplastida
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.14 Archaeplastida
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.15 Archaeplastida
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.12 Archaeplastida
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.09 Archaeplastida
Solyc03g097900.3.1 No alias component RPS3a of SSU proteome 0.09 Archaeplastida
Solyc06g072490.3.1 No alias component RPS3a of SSU proteome 0.16 Archaeplastida
Solyc09g082520.3.1 No alias component RPS3a of SSU proteome 0.03 Archaeplastida
Zm00001e000767_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e038777_P001 No alias component RPS3a of SSU proteome 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!