Smo39404

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-ABI3 transcription factor

Gene families : OG0001110 (Archaeplastida) Phylogenetic Tree(s): OG0001110_tree ,
OG_05_0000678 (LandPlants) Phylogenetic Tree(s): OG_05_0000678_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo39404

Target	Alias	Description	ECC score	Gene Family Method
AT3G24650	ABI3, SIS10	AP2/B3-like transcriptional factor family protein	0.03	Archaeplastida
MA_216909g0010	No alias	transcription factor (LAV-ABI3)	0.02	Archaeplastida
Solyc06g083600.3.1	No alias	transcription factor (LAV-ABI3)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0015939	pantothenate metabolic process	IEP	Neighborhood
BP	GO:0015940	pantothenate biosynthetic process	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
BP	GO:0035434	copper ion transmembrane transport	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	1	85

External Links

No external refs found!