Smo402904


Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000030 (Archaeplastida) Phylogenetic Tree(s): OG0000030_tree ,
OG_05_0034249 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo402904
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT5G49130 No alias MATE efflux family protein 0.02 Archaeplastida
LOC_Os05g48040.1 No alias metabolite transporter (DTX) 0.01 Archaeplastida
LOC_Os06g36330.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
LOC_Os07g33310.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
LOC_Os08g43250.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
LOC_Os10g20450.1 No alias metabolite transporter (DTX) 0.03 Archaeplastida
Solyc03g112250.1.1 No alias metabolite transporter (DTX) 0.02 Archaeplastida
Zm00001e012504_P001 No alias metabolite transporter (DTX) 0.02 Archaeplastida
Zm00001e035104_P001 No alias metabolite transporter (DTX) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR002528 MATE_fam 63 155
No external refs found!