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  5. AMTR_s00016p00063620

AMTR_s00016p00063620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.30

No description available


Gene families : OG0000377 (Archaeplastida) Phylogenetic Tree(s): OG0000377_tree ,
OG_05_0000243 (LandPlants) Phylogenetic Tree(s): OG_05_0000243_tree ,
OG_06_0024388 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00063620
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00060410 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.03 Archaeplastida
AT1G70550 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
GSVIVT01006653001 No alias No description available 0.04 Archaeplastida
GSVIVT01013810001 No alias No description available 0.03 Archaeplastida
Pp3c6_29500V3.1 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
Smo438522 No alias No description available 0.03 Archaeplastida
Zm00001e020987_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037003_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 1 79
IPR004314 Neprosin 84 312
No external refs found!