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  5. Smo404546

Smo404546


Description : AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana


Gene families : OG0000411 (Archaeplastida) Phylogenetic Tree(s): OG0000411_tree ,
OG_05_0000205 (LandPlants) Phylogenetic Tree(s): OG_05_0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo404546
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
AMTR_s00012p00257450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
AMTR_s00041p00022450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.04 Archaeplastida
AMTR_s00041p00025000 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.02 Archaeplastida
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 0.03 Archaeplastida
AT4G12050 No alias Predicted AT-hook DNA-binding family protein 0.03 Archaeplastida
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.03 Archaeplastida
AT4G22810 No alias Predicted AT-hook DNA-binding family protein 0.04 Archaeplastida
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.02 Archaeplastida
GSVIVT01019932001 No alias AT-hook motif nuclear-localized protein 24... 0.03 Archaeplastida
GSVIVT01036210001 No alias AT-hook motif nuclear-localized protein 19... 0.03 Archaeplastida
Gb_15730 No alias AT-hook motif nuclear-localized protein 16... 0.04 Archaeplastida
LOC_Os02g25020.1 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
LOC_Os02g48320.3 No alias AT-hook motif nuclear-localized protein 25... 0.03 Archaeplastida
LOC_Os04g50030.1 No alias AT-hook motif nuclear-localized protein 23... 0.04 Archaeplastida
LOC_Os08g06320.1 No alias AT-hook motif nuclear-localized protein 23... 0.02 Archaeplastida
LOC_Os08g44910.1 No alias AT-hook motif nuclear-localized protein 20... 0.02 Archaeplastida
MA_2055g0010 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
MA_2613706g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_291092g0010 No alias AT-hook motif nuclear-localized protein 20... 0.02 Archaeplastida
MA_41289g0010 No alias AT-hook motif nuclear-localized protein 17... 0.02 Archaeplastida
MA_90407g0010 No alias AT-hook motif nuclear-localized protein 22... 0.02 Archaeplastida
Solyc08g077010.1.1 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
Solyc08g079720.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.02 Archaeplastida
Zm00001e001193_P001 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Zm00001e003878_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e014298_P001 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Zm00001e016254_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e022037_P001 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Zm00001e024863_P001 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 2 115
No external refs found!