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Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo405220 | |
| Cluster | HCCA: Cluster_70 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G09530 | PIF3, POC1, PAP3 | phytochrome interacting factor 3 | 0.01 | Archaeplastida | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.01 | Archaeplastida | |
| AT2G46970 | PIL1 | phytochrome interacting factor 3-like 1 | 0.03 | Archaeplastida | |
| AT3G21330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | Archaeplastida | |
| AT3G50330 | HEC2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G01305 | No alias | No description available | 0.04 | Archaeplastida | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.01 | Archaeplastida | |
| AT5G67060 | HEC1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| Gb_27869 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Gb_30839 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| LOC_Os01g02110.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g61480.1 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| LOC_Os05g46370.1 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| LOC_Os08g01700.1 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| MA_10156436g0010 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| MA_128707g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_83500g0010 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| Solyc10g018510.2.1 | No alias | transcription factor (bHLH) | 0.06 | Archaeplastida | |
| Solyc12g088790.3.1 | No alias | transcription factor (bHLH) | 0.09 | Archaeplastida | |
| Zm00001e015610_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Zm00001e019392_P001 | No alias | transcription factor (bHLH) | 0.01 | Archaeplastida | |
| Zm00001e021883_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 299 | 339 |
| No external refs found! |