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  5. AMTR_s00016p00120390

AMTR_s00016p00120390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.80

Description : GEM-like protein 5 OS=Arabidopsis thaliana


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000750 (LandPlants) Phylogenetic Tree(s): OG_05_0000750_tree ,
OG_06_0006147 (SeedPlants) Phylogenetic Tree(s): OG_06_0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00120390
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
AT5G13200 No alias GRAM domain family protein 0.04 Archaeplastida
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Archaeplastida
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01012919001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033015001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_00888 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_00889 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os02g42440.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g08860.1 No alias GEM-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os03g52670.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g44510.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g29400.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10147276g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_2965641g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_99608g0020 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo85701 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g098660.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Solyc11g011590.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023068_P001 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039556_P001 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041280_P002 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 132 205
No external refs found!