Smo405704


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo405704
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G42660 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
AT4G04605 No alias No description available 0.03 Archaeplastida
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025502001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_08427 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_335624g0020 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Mp4g08700.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c2_2200V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_30710V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo270428 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
Solyc09g091880.4.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g080460.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!