Smo405868

Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP14/POP5 component

Gene families : OG0006177 (Archaeplastida) Phylogenetic Tree(s): OG0006177_tree ,
OG_05_0006180 (LandPlants) Phylogenetic Tree(s): OG_05_0006180_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo405868
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G04635	EMB1687	ribonuclease P family protein / Rpp14 family protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004274	FCP1_dom	7	176

External Links

No external refs found!