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  5. Smo406315

Smo406315


Description : Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000394 (LandPlants) Phylogenetic Tree(s): OG_05_0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo406315
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.06 Archaeplastida
AMTR_s00013p00256900 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 Archaeplastida
AT2G21660 CCR2, ATGRP7,... cold, circadian rhythm, and rna binding 2 0.02 Archaeplastida
AT2G37510 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.08 Archaeplastida
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.04 Archaeplastida
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.02 Archaeplastida
GSVIVT01014553001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
GSVIVT01025527001 No alias Organelle RRM domain-containing protein 2, mitochondrial... 0.01 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
MA_14910g0010 No alias No annotation 0.02 Archaeplastida
MA_77292g0010 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Mp3g06220.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... 0.03 Archaeplastida
Mp4g15980.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.07 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Solyc10g051377.1.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 22 92
No external refs found!