Description : Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0001224 (LandPlants) Phylogenetic Tree(s): OG_05_0001224_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo406783 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00095p00027730 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80270,... | 0.04 | Archaeplastida | |
AT1G60770 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
AT1G80270 | PPR596 | PENTATRICOPEPTIDE REPEAT 596 | 0.08 | Archaeplastida | |
AT2G20710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT3G15590 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
AT4G01990 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
GSVIVT01006654001 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.04 | Archaeplastida | |
GSVIVT01031246001 | No alias | Pentatricopeptide repeat-containing protein At4g01990,... | 0.03 | Archaeplastida | |
GSVIVT01033642001 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.03 | Archaeplastida | |
Gb_27873 | No alias | RNA editing factor (POCO) | 0.03 | Archaeplastida | |
LOC_Os02g55310.1 | No alias | Pentatricopeptide repeat-containing protein At5g27460... | 0.02 | Archaeplastida | |
LOC_Os04g25410.1 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | Archaeplastida | |
LOC_Os04g46010.1 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | Archaeplastida | |
LOC_Os07g40750.1 | No alias | Pentatricopeptide repeat-containing protein At4g21705,... | 0.02 | Archaeplastida | |
LOC_Os10g35730.1 | No alias | Pentatricopeptide repeat-containing protein At4g02820,... | 0.02 | Archaeplastida | |
LOC_Os10g35750.1 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | Archaeplastida | |
LOC_Os12g07260.1 | No alias | RNA editing factor (POCO) | 0.07 | Archaeplastida | |
MA_7558g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.05 | Archaeplastida | |
Solyc01g079320.4.1 | No alias | Pentatricopeptide repeat-containing protein At1g02370,... | 0.03 | Archaeplastida | |
Solyc02g078350.3.1 | No alias | Pentatricopeptide repeat-containing protein At4g21705,... | 0.02 | Archaeplastida | |
Solyc06g005140.3.1 | No alias | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | Archaeplastida | |
Solyc07g063220.4.1 | No alias | Pentatricopeptide repeat-containing protein At4g21705,... | 0.04 | Archaeplastida | |
Solyc11g006380.2.1 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.05 | Archaeplastida | |
Solyc12g020050.2.1 | No alias | RNA editing factor (POCO) | 0.04 | Archaeplastida | |
Zm00001e017396_P001 | No alias | RNA editing factor (POCO) | 0.06 | Archaeplastida | |
Zm00001e025470_P001 | No alias | RNA editing factor (POCO) | 0.08 | Archaeplastida | |
Zm00001e033119_P002 | No alias | RNA editing factor (POCO) | 0.03 | Archaeplastida | |
Zm00001e036620_P001 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004017 | adenylate kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 300 | 349 |
No external refs found! |